EnhancerDB
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  3. rs78379334[chr17:54863496]
Enhancers that have rs78379334[chr17:54863496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs78379334[chr17:54863496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54862572 54863603 ZNF274 GTRD no Bone Marrow (K562) 21773108
chr17 54863494 54863509 FOXP1 JASPAR yes 54912978
chr17 54863495 54863506 FOXA1 JASPAR yes 54912979
chr17 54863496 54863508 FOXC2 JASPAR yes 54912980
Genes associated with rs78379334[chr17:54863496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More