EnhancerDB
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  3. rs78439163[chr17:39706385]
Enhancers that have rs78439163[chr17:39706385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78439163[chr17:39706385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39704666 39706567 TCF7L2 GTRD no Colon (HCT116) 21757844
chr17 39704666 39706567 TCF7L2 GTRD no Colon (HCT116) 108258961
chr17 39704990 39706666 TCF7L2 GTRD no Colon (HCT116) 21757853
chr17 39704990 39706666 TCF7L2 GTRD no Colon (HCT116) 108258973
chr17 39705043 39706510 TCF7L2 GTRD no Colon (HCT116) 21757855
chr17 39705043 39706510 TCF7L2 GTRD no Colon (HCT116) 108258977
chr17 39705076 39706531 TCF7L2 GTRD no Colon (HCT116) 21757858
chr17 39705076 39706531 TCF7L2 GTRD no Colon (HCT116) 108258980
chr17 39705312 39706588 ZNF143 GTRD no Epithelial (MCF-7) 21757878
chr17 39705312 39706588 ZNF143 GTRD no Epithelial (MCF-7) 108259017
chr17 39705340 39706641 ZNF143 GTRD no Epithelial (MCF-7) 21757880
chr17 39705340 39706641 ZNF143 GTRD no Epithelial (MCF-7) 108259019
chr17 39705350 39706956 ZNF143 GTRD no Epithelial (MCF-7) 21757884
chr17 39705350 39706956 ZNF143 GTRD no Epithelial (MCF-7) 108259023
chr17 39705362 39706624 TCF7L2 GTRD no Colon (HCT116) 21757885
chr17 39705362 39706624 TCF7L2 GTRD no Colon (HCT116) 108259024
chr17 39705389 39706597 ZNF143 GTRD no Epithelial (MCF-7) 21757886
chr17 39705459 39706645 ZNF143 GTRD no Epithelial (MCF-7) 21757890
chr17 39705466 39706521 ZNF143 GTRD no Epithelial (MCF-7) 21757891
chr17 39705475 39706538 ZNF143 GTRD no Epithelial (MCF-7) 21757892
chr17 39705488 39706660 ZNF143 GTRD no Epithelial (MCF-7) 21757893
chr17 39705494 39706429 ZNF143 GTRD no Epithelial (MCF-7) 21757894
chr17 39705516 39706386 ZNF143 GTRD no Epithelial (MCF-7) 21757896
chr17 39705516 39706502 ZNF143 GTRD no Epithelial (MCF-7) 21757897
chr17 39705524 39706717 ZNF143 GTRD no Epithelial (MCF-7) 21757898
chr17 39705554 39706506 ZNF143 GTRD no Epithelial (MCF-7) 21757904
chr17 39705555 39706518 ZNF143 GTRD no Epithelial (MCF-7) 21757906
chr17 39705577 39706385 ZNF143 GTRD no Epithelial (MCF-7) 21757911
chr17 39705583 39706532 ZNF143 GTRD no Epithelial (MCF-7) 21757914
chr17 39705587 39706910 ZNF143 GTRD no Epithelial (MCF-7) 21757916
chr17 39705588 39706510 ZNF143 GTRD no Epithelial (MCF-7) 21757917
chr17 39705605 39706440 ZNF143 GTRD no Epithelial (MCF-7) 21757922
chr17 39705621 39706480 ZNF143 GTRD no Epithelial (MCF-7) 21757923
chr17 39705630 39706406 ZNF143 GTRD no Epithelial (MCF-7) 21757924
chr17 39705636 39706565 ZNF143 GTRD no Epithelial (MCF-7) 21757926
chr17 39705648 39706628 ZNF143 GTRD no Epithelial (MCF-7) 21757927
chr17 39705651 39706550 ZNF143 GTRD no Epithelial (MCF-7) 21757928
chr17 39705692 39706416 ZNF143 GTRD no Epithelial (MCF-7) 21757935
chr17 39705708 39706548 ZNF143 GTRD no Epithelial (MCF-7) 21757939
chr17 39705720 39706597 ZNF143 GTRD no Epithelial (MCF-7) 21757940
chr17 39706365 39706385 PPARG JASPAR yes 54264139
chr17 39706380 39706388 EHF JASPAR yes 54264140
Genes associated with rs78439163[chr17:39706385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More