EnhancerDB
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  3. rs78503239[chr10:29976928]
Enhancers that have rs78503239[chr10:29976928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29973883 29985335 enh62024
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell)
chr10 29976515 29977146 vista6955
VISTA
Transcript factors that have rs78503239[chr10:29976928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29976227 29976933 ZBTB33 GTRD no Brain (SK-N-SH) 21424759
chr10 29976227 29976933 ZBTB33 GTRD no Brain (SK-N-SH) 107905987
chr10 29976758 29976977 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107905991
chr10 29976758 29976978 REST UCSC Txn Factor no Conserved 107905992
chr10 29976781 29976974 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107905993
chr10 29976782 29977046 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107905994
chr10 29976821 29976928 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21424760
chr10 29976821 29976928 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107905995
chr10 29976824 29976930 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21424761
chr10 29976824 29976930 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107905996
chr10 29976920 29976936 SOX8 JASPAR yes 21067971
chr10 29976920 29976936 SOX8 JASPAR yes 126339187
Genes associated with rs78503239[chr10:29976928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More