EnhancerDB
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  3. rs78534689[chr1:6428553]
Enhancers that have rs78534689[chr1:6428553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6411925 6440995 enh26
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach
Transcript factors that have rs78534689[chr1:6428553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6428546 6428565 CTCF JASPAR yes 26395415
chr1 6428552 6428566 PLAG1 JASPAR yes 26395416
Genes associated with rs78534689[chr1:6428553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More