EnhancerDB
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  3. rs78538835[chr1:8690070]
Enhancers that have rs78538835[chr1:8690070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8683665 8706215 enh26519
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Lung (PC-9) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
chr1 8690020 8690153 vista257
VISTA
Transcript factors that have rs78538835[chr1:8690070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8688806 8690238 ZNF274 GTRD no Blood (GM12878) 107801981
chr1 8690053 8690074 IRF1 JASPAR yes 26579190
chr1 8690053 8690074 IRF1 JASPAR yes 118225661
chr1 8690056 8690070 SPI1 JASPAR yes 26579191
chr1 8690056 8690070 SPI1 JASPAR yes 118225662
chr1 8690057 8690078 ZNF263 JASPAR yes 26579192
chr1 8690057 8690078 ZNF263 JASPAR yes 118225663
chr1 8690059 8690080 IRF1 JASPAR yes 26579193
chr1 8690059 8690080 IRF1 JASPAR yes 118225664
chr1 8690061 8690076 STAT2 JASPAR yes 26579194
chr1 8690061 8690076 STAT2 JASPAR yes 118225665
chr1 8690062 8690076 SPIC JASPAR yes 26579195
chr1 8690062 8690076 STAT1 JASPAR yes 26579196
chr1 8690062 8690076 SPIC JASPAR yes 118225666
chr1 8690062 8690076 STAT1 JASPAR yes 118225667
chr1 8690063 8690077 IRF8 JASPAR yes 26579197
chr1 8690063 8690077 IRF8 JASPAR yes 118225668
chr1 8690063 8690078 IRF9 JASPAR yes 26579198
chr1 8690063 8690078 IRF9 JASPAR yes 118225669
Genes associated with rs78538835[chr1:8690070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More