EnhancerDB
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  3. rs78540166[chr5:171560427]
Enhancers that have rs78540166[chr5:171560427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171553845 171562762 enh22804
Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Bone (Osteoblast) Placenta Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Stomach
chr5 171560333 171560981 vista50124
VISTA
Transcript factors that have rs78540166[chr5:171560427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171560284 171560684 FOS UCSC Txn Factor no Conserved 108537429
chr5 171560421 171560437 RFX2 JASPAR yes 67766037
chr5 171560421 171560437 RFX3 JASPAR yes 67766038
chr5 171560421 171560437 RFX4 JASPAR yes 67766039
chr5 171560421 171560437 RFX2 JASPAR yes 70760532
chr5 171560421 171560437 RFX3 JASPAR yes 70760533
chr5 171560421 171560437 RFX4 JASPAR yes 70760534
Genes associated with rs78540166[chr5:171560427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More