EnhancerDB
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  3. rs78550333[chr1:117887212]
Enhancers that have rs78550333[chr1:117887212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117874505 117891355 enh12197
Prostate (PC-3) Large Intestine Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs78550333[chr1:117887212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117887192 117887213 IRF1 JASPAR yes 31875732
chr1 117887200 117887215 FOXP1 JASPAR yes 31875737
chr1 117887200 117887221 IRF1 JASPAR yes 31875738
chr1 117887202 117887213 FOXC1 JASPAR yes 31875740
chr1 117887202 117887214 FOXC2 JASPAR yes 31875741
chr1 117887204 117887219 FOXP1 JASPAR yes 31875742
chr1 117887205 117887226 IRF1 JASPAR yes 31875743
chr1 117887206 117887221 FOXP1 JASPAR yes 31875744
chr1 117887210 117887216 TBP TRANSFAC yes 31875745
Genes associated with rs78550333[chr1:117887212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More