EnhancerDB
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  3. rs78554727[chr17:47189252]
Enhancers that have rs78554727[chr17:47189252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47176198 47191535 enh17201
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78554727[chr17:47189252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47187780 47190038 ZNF274 GTRD no Liver (HepG2) 21768306
chr17 47187898 47190156 ZNF274 GTRD no Liver (HepG2) 21768307
chr17 47188005 47190097 ZNF274 GTRD no Liver (HepG2) 21768308
chr17 47188025 47190321 ZNF274 GTRD no Cervix (HeLa-S3) 21768309
chr17 47188059 47190055 ZNF274 GTRD no Cervix (HeLa-S3) 21768310
chr17 47188060 47189903 ZNF274 GTRD no Liver (HepG2) 21768311
chr17 47188076 47189981 ZNF274 GTRD no Cervix (HeLa-S3) 21768312
chr17 47188096 47189980 ZNF274 GTRD no Cervix (HeLa-S3) 21768313
chr17 47188096 47189990 ZNF274 GTRD no Cervix (HeLa-S3) 21768314
chr17 47188122 47189966 ZNF274 GTRD no Cervix (HeLa-S3) 21768315
chr17 47188128 47189979 ZNF274 GTRD no Liver (HepG2) 21768316
chr17 47188138 47189951 ZNF274 GTRD no Liver (HepG2) 21768317
chr17 47188156 47189883 ZNF274 GTRD no Cervix (HeLa-S3) 21768318
chr17 47188156 47189967 ZNF143 GTRD no Epithelial (MCF-7) 21768319
chr17 47188164 47190027 ZNF274 GTRD no Liver (HepG2) 21768320
chr17 47188184 47189919 ZNF143 GTRD no Epithelial (MCF-7) 21768322
chr17 47188206 47190120 ZNF274 GTRD no Cervix (HeLa-S3) 21768324
chr17 47188208 47189824 ZNF274 GTRD no Liver (HepG2) 21768325
chr17 47188250 47189980 ZNF274 GTRD no Liver (HepG2) 21768326
chr17 47188271 47189958 ZNF274 GTRD no Liver (HepG2) 21768327
chr17 47188271 47189984 ZNF274 GTRD no Cervix (HeLa-S3) 21768328
chr17 47188312 47189908 ZNF274 GTRD no Liver (HepG2) 21768330
chr17 47188319 47189863 ZNF274 GTRD no Liver (HepG2) 21768331
chr17 47188340 47189659 ZNF274 GTRD no Liver (HepG2) 21768332
chr17 47188344 47189872 ZNF143 GTRD no Epithelial (MCF-7) 21768333
chr17 47188360 47189781 ZNF274 GTRD no Liver (HepG2) 21768334
chr17 47188373 47189850 ZNF143 GTRD no Epithelial (MCF-7) 21768335
chr17 47188377 47189948 ZNF274 GTRD no Liver (HepG2) 21768336
chr17 47188470 47189753 ZNF274 GTRD no Liver (HepG2) 21768337
chr17 47188568 47189863 ZNF274 GTRD no Liver (HepG2) 21768338
chr17 47188577 47189874 ZNF274 GTRD no Liver (HepG2) 21768339
chr17 47188608 47189940 ZNF143 GTRD no Epithelial (MCF-7) 21768340
chr17 47188615 47189818 ZNF274 GTRD no Liver (HepG2) 21768341
chr17 47188643 47189961 ZNF274 GTRD no Liver (HepG2) 21768342
chr17 47188651 47189870 ZNF274 GTRD no Liver (HepG2) 21768343
chr17 47188659 47189803 ZNF143 GTRD no Epithelial (MCF-7) 21768344
chr17 47188667 47189743 ZNF274 GTRD no Cervix (HeLa-S3) 21768345
chr17 47188679 47189694 ZNF143 GTRD no Epithelial (MCF-7) 21768346
chr17 47188682 47189735 ZNF143 GTRD no Epithelial (MCF-7) 21768347
chr17 47188682 47189756 ZNF143 GTRD no Epithelial (MCF-7) 21768348
chr17 47188712 47189703 ZNF274 GTRD no Liver (HepG2) 21768351
chr17 47188712 47189855 ZNF143 GTRD no Epithelial (MCF-7) 21768352
chr17 47188713 47189919 ZNF274 GTRD no Liver (HepG2) 21768353
chr17 47188723 47189827 ZNF274 GTRD no Liver (HepG2) 21768354
chr17 47188731 47189403 ZNF143 GTRD no Epithelial (MCF-7) 21768355
chr17 47188731 47189928 ZNF274 GTRD no Liver (HepG2) 21768356
chr17 47188734 47189761 ZNF274 GTRD no Liver (HepG2) 21768357
chr17 47188734 47189892 ZNF274 GTRD no Liver (HepG2) 21768358
chr17 47188737 47189731 ZNF274 GTRD no Liver (HepG2) 21768359
chr17 47188739 47189857 ZNF274 GTRD no Liver (HepG2) 21768360
chr17 47188743 47189705 ZNF143 GTRD no Epithelial (MCF-7) 21768361
chr17 47188786 47189917 ZNF274 GTRD no Cervix (HeLa-S3) 21768363
chr17 47188788 47189771 ZNF274 GTRD no Liver (HepG2) 21768364
chr17 47188812 47189767 ZNF274 GTRD no Liver (HepG2) 21768365
chr17 47188831 47189795 ZNF274 GTRD no Cervix (HeLa-S3) 21768366
chr17 47188852 47189349 ZNF274 GTRD no Liver (HepG2) 21768367
chr17 47188979 47189738 SOX2 GTRD no Neural Stem Cells (H9) 21768370
Genes associated with rs78554727[chr17:47189252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More