EnhancerDB
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Enhancers that have rs78559446[chr15:39530983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39520525 39536878 enh31303
Prostate (PC-3) Esophagus Astrocyte Uterus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78559446[chr15:39530983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39529818 39531811 ZNF143 GTRD no Epithelial (MCF-7) 21648309
chr15 39530269 39531502 ZNF143 GTRD no Epithelial (MCF-7) 21648310
chr15 39530353 39531644 ZNF143 GTRD no Epithelial (MCF-7) 21648311
chr15 39530378 39531476 ZNF143 GTRD no Epithelial (MCF-7) 21648312
chr15 39530416 39531509 ZNF143 GTRD no Epithelial (MCF-7) 21648313
chr15 39530483 39531199 ZNF143 GTRD no Epithelial (MCF-7) 21648314
chr15 39530493 39531445 ZNF143 GTRD no Epithelial (MCF-7) 21648315
chr15 39530494 39531406 ZNF143 GTRD no Epithelial (MCF-7) 21648316
chr15 39530582 39531298 ZNF143 GTRD no Epithelial (MCF-7) 21648317
chr15 39530598 39531234 ZNF143 GTRD no Epithelial (MCF-7) 21648318
chr15 39530611 39531302 ZNF143 GTRD no Epithelial (MCF-7) 21648319
chr15 39530612 39531243 ZNF143 GTRD no Epithelial (MCF-7) 21648320
chr15 39530619 39531256 ZNF143 GTRD no Epithelial (MCF-7) 21648321
chr15 39530619 39531360 ZNF143 GTRD no Epithelial (MCF-7) 21648322
chr15 39530640 39531287 ZNF143 GTRD no Epithelial (MCF-7) 21648323
chr15 39530663 39531196 ZNF143 GTRD no Epithelial (MCF-7) 21648324
chr15 39530680 39531283 ZNF143 GTRD no Epithelial (MCF-7) 21648325
chr15 39530684 39531277 ZNF143 GTRD no Epithelial (MCF-7) 21648326
chr15 39530688 39531128 ZNF143 GTRD no Epithelial (MCF-7) 21648327
chr15 39530688 39531267 ZNF143 GTRD no Epithelial (MCF-7) 21648328
chr15 39530701 39531242 ZNF143 GTRD no Epithelial (MCF-7) 21648329
chr15 39530729 39531273 ZNF143 GTRD no Epithelial (MCF-7) 21648330
chr15 39530741 39531340 ZNF143 GTRD no Epithelial (MCF-7) 21648331
chr15 39530743 39531305 ZNF143 GTRD no Epithelial (MCF-7) 21648332
chr15 39530745 39531312 ZNF143 GTRD no Epithelial (MCF-7) 21648333
chr15 39530770 39531279 ZNF143 GTRD no Epithelial (MCF-7) 21648334
chr15 39530849 39531227 ZNF143 GTRD no Epithelial (MCF-7) 21648335
chr15 39530936 39531219 ZNF143 GTRD no Epithelial (MCF-7) 21648336
chr15 39530978 39530988 FIGLA JASPAR yes 22868222
chr15 39530978 39530988 TCF3 JASPAR yes 22868223
chr15 39530979 39530988 SNAI2 JASPAR yes 22868224
chr15 39530980 39530985 USF2 TRANSFAC yes 22868225
Genes associated with rs78559446[chr15:39530983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More