EnhancerDB
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  3. rs78572756[chr1:167240727]
Enhancers that have rs78572756[chr1:167240727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs78572756[chr1:167240727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167240715 167240730 MEF2A JASPAR yes 32856418
chr1 167240716 167240731 MEF2C JASPAR yes 32856419
chr1 167240717 167240729 MEF2A JASPAR yes 32856420
chr1 167240717 167240729 MEF2B JASPAR yes 32856421
chr1 167240717 167240729 MEF2D JASPAR yes 32856422
chr1 167240717 167240732 FOXA1 JASPAR yes 32856423
chr1 167240718 167240728 MEF2A JASPAR yes 32856424
chr1 167240719 167240731 FOXC2 JASPAR yes 32856425
chr1 167240720 167240731 FOXB1 JASPAR yes 32856426
chr1 167240720 167240731 FOXC1 JASPAR yes 32856427
chr1 167240727 167240733 TCF1 TRANSFAC yes 32856429
Genes associated with rs78572756[chr1:167240727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More