EnhancerDB
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  3. rs78579514[chr17:53525314]
Enhancers that have rs78579514[chr17:53525314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs78579514[chr17:53525314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53525310 53525324 POU1F1 JASPAR yes 54852134
chr17 53525311 53525315 YY1 TRANSFAC yes 54852135
chr17 53525311 53525323 POU3F1 JASPAR yes 54852136
chr17 53525311 53525323 POU3F2 JASPAR yes 54852137
chr17 53525311 53525324 POU3F3 JASPAR yes 54852138
chr17 53525312 53525324 POU2F1 JASPAR yes 54852139
chr17 53525313 53525322 POU3F4 JASPAR yes 54852140
chr17 53525313 53525322 POU5F1B JASPAR yes 54852141
Genes associated with rs78579514[chr17:53525314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More