EnhancerDB
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  3. rs78650971[chr17:80461871]
Enhancers that have rs78650971[chr17:80461871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs78650971[chr17:80461871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80461157 80462482 TCF7L2 GTRD no Colon (HCT116) 21800691
chr17 80461211 80462987 TCF7L2 GTRD no Colon (HCT116) 21800692
chr17 80461290 80462484 TCF7L2 GTRD no Colon (HCT116) 21800694
chr17 80461456 80462102 ZNF143 GTRD no Epithelial (MCF-7) 21800695
chr17 80461733 80462394 ZNF274 GTRD no Bone Marrow (K562) 21800696
chr17 80461782 80462160 TCF7L2 GTRD no Colon (HCT116) 21800697
chr17 80461798 80462122 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800698
chr17 80461854 80462201 TCF7L2 GTRD no Colon (HCT116) 21800699
chr17 80461857 80461872 RFX5 JASPAR yes 56368686
chr17 80461858 80461877 CTCF JASPAR yes 56368687
Genes associated with rs78650971[chr17:80461871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More