EnhancerDB
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  3. rs78665685[chr19:4590011]
Enhancers that have rs78665685[chr19:4590011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs78665685[chr19:4590011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4589341 4590335 ZNF274 GTRD no Liver (HepG2) 21841876
chr19 4589370 4590361 ZNF274 GTRD no Cervix (HeLa-S3) 21841877
chr19 4589373 4590372 TCF7L2 GTRD no Colon (HCT116) 21841878
chr19 4589378 4590249 ZNF274 GTRD no Liver (HepG2) 21841879
chr19 4589394 4590115 ZNF274 GTRD no Liver (HepG2) 21841880
chr19 4589418 4590037 ZNF274 GTRD no Liver (HepG2) 21841882
chr19 4589432 4590156 ZNF274 GTRD no Liver (HepG2) 21841883
chr19 4589467 4590066 ZNF274 GTRD no Liver (HepG2) 21841885
chr19 4589469 4590152 ZNF274 GTRD no Liver (HepG2) 21841886
chr19 4589472 4590015 ZNF274 GTRD no Liver (HepG2) 21841887
chr19 4589514 4590031 ZNF274 GTRD no Liver (HepG2) 21841890
chr19 4589534 4590193 ZNF274 GTRD no Liver (HepG2) 21841892
chr19 4589536 4590303 ZNF274 GTRD no Liver (HepG2) 21841893
chr19 4589544 4590096 ZNF274 GTRD no Cervix (HeLa-S3) 21841894
chr19 4589547 4590025 ZNF274 GTRD no Liver (HepG2) 21841895
chr19 4589605 4590025 ZNF274 GTRD no Liver (HepG2) 21841900
chr19 4589641 4590085 ZNF274 GTRD no Liver (HepG2) 21841902
chr19 4589998 4590012 TCF7L2 JASPAR yes 112177135
chr19 4589998 4590013 LEF1 JASPAR yes 112177136
chr19 4589998 4590013 NR2C2 JASPAR yes 112177137
Genes associated with rs78665685[chr19:4590011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More