EnhancerDB
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  3. rs78666479[chr17:79376060]
Enhancers that have rs78666479[chr17:79376060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78666479[chr17:79376060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79375397 79376351 TCF7L2 GTRD no Colon (HCT116) 21797937
chr17 79375397 79376351 TCF7L2 GTRD no Colon (HCT116) 108309555
chr17 79375623 79376103 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797938
chr17 79375623 79376103 ZNF263 UCSC Txn Factor no Conserved 108309556
chr17 79375623 79376103 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108309557
chr17 79375706 79376082 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21797940
chr17 79375706 79376082 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108309561
chr17 79375708 79376103 CTCF UCSC Txn Factor no Conserved 108309563
chr17 79375735 79376105 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797942
chr17 79375735 79376105 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108309564
chr17 79375738 79376098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309565
chr17 79375755 79376139 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108309566
chr17 79375790 79376080 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797946
chr17 79375790 79376080 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108309572
chr17 79375796 79376066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797947
chr17 79375796 79376066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108309573
chr17 79375814 79376090 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108309581
chr17 79375828 79376104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797953
chr17 79375828 79376104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108309584
chr17 79376059 79376063 ESR1 TRANSFAC yes 56323460
Genes associated with rs78666479[chr17:79376060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More