EnhancerDB
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  3. rs78696329[chr5:171597125]
Enhancers that have rs78696329[chr5:171597125]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs78696329[chr5:171597125]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171597117 171597128 DMRT3 JASPAR yes 67770903
chr5 171597120 171597141 IRF1 JASPAR yes 67770904
chr5 171597121 171597126 GATA2 JASPAR yes 67770905
chr5 171597121 171597142 IRF1 JASPAR yes 67770906
chr5 171597122 171597143 IRF1 JASPAR yes 67770907
chr5 171597124 171597139 FOXP1 JASPAR yes 67770908
chr5 171597125 171597140 FOXP1 JASPAR yes 67770909
Genes associated with rs78696329[chr5:171597125], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More