EnhancerDB
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  3. rs78776020[chr17:76966123]
Enhancers that have rs78776020[chr17:76966123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs78776020[chr17:76966123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76966111 76966123 GLI2 JASPAR yes 56195290
Genes associated with rs78776020[chr17:76966123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 76000249 76104916 + TNRC6C ENSG00000078687.12 76000249 861207 Breast 0.0719463 16300