EnhancerDB
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  3. rs78780190[chr2:227498026]
Enhancers that have rs78780190[chr2:227498026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227470185 227504834 enh19282
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs78780190[chr2:227498026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227498018 227498033 HNF1A JASPAR yes 81476291
chr2 227498019 227498031 HNF1B JASPAR yes 81476292
chr2 227498019 227498032 HNF1B JASPAR yes 81476293
chr2 227498022 227498038 SOX4 JASPAR yes 81476294
chr2 227498023 227498037 POU1F1 JASPAR yes 81476295
chr2 227498024 227498036 POU3F1 JASPAR yes 81476296
chr2 227498024 227498036 POU3F2 JASPAR yes 81476297
chr2 227498024 227498037 POU3F3 JASPAR yes 81476298
chr2 227498025 227498029 YY1 TRANSFAC yes 81476299
chr2 227498025 227498037 POU2F1 JASPAR yes 81476300
chr2 227498026 227498041 JUND JASPAR yes 81476301
Genes associated with rs78780190[chr2:227498026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More