EnhancerDB
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  3. rs78790875[chr6:42009106]
Enhancers that have rs78790875[chr6:42009106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78790875[chr6:42009106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42009099 42009112 NFKB1 JASPAR yes 101689189
chr6 42009099 42009112 NFKB2 JASPAR yes 101689190
chr6 42009100 42009110 NFKB1 JASPAR yes 101689191
chr6 42009100 42009110 RELA JASPAR yes 101689192
chr6 42009100 42009111 NFKB1 JASPAR yes 101689193
chr6 42009105 42009117 INSM1 JASPAR yes 101689194
Genes associated with rs78790875[chr6:42009106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More