EnhancerDB
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  3. rs78793041[chr2:28582459]
Enhancers that have rs78793041[chr2:28582459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr2 28582195 28582710 vista30824
VISTA
Transcript factors that have rs78793041[chr2:28582459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28582129 28582515 RUNX3 UCSC Txn Factor no Conserved 108431600
chr2 28582132 28582743 MAX UCSC Txn Factor no Conserved 108431601
chr2 28582340 28582480 NR2F2 UCSC Txn Factor no Conserved 108431603
chr2 28582363 28582712 BHLHE40 UCSC Txn Factor no Conserved 108431604
chr2 28582454 28582469 HNF4G JASPAR yes 22024511
chr2 28582454 28582469 NR2C2 JASPAR yes 22024512
chr2 28582454 28582469 HNF4G JASPAR yes 72641661
chr2 28582454 28582469 NR2C2 JASPAR yes 72641662
chr2 28582455 28582469 NR2F1 JASPAR yes 22024513
chr2 28582455 28582469 NR2F1 JASPAR yes 72641663
chr2 28582455 28582470 HNF4A JASPAR yes 22024514
chr2 28582455 28582470 HNF4A JASPAR yes 72641664
chr2 28582456 28582461 ATF1 TRANSFAC yes 22024515
chr2 28582456 28582461 ATF1 TRANSFAC yes 72641665
Genes associated with rs78793041[chr2:28582459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More