EnhancerDB
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  3. rs78828409[chr2:216522948]
Enhancers that have rs78828409[chr2:216522948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216515065 216536375 enh34238
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs78828409[chr2:216522948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216522944 216522954 EVX1 JASPAR yes 80790434
chr2 216522944 216522954 EVX2 JASPAR yes 80790435
chr2 216522944 216522954 LHX6 JASPAR yes 80790436
chr2 216522948 216522959 NRL JASPAR yes 80790437
Genes associated with rs78828409[chr2:216522948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More