EnhancerDB
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  3. rs78840473[chr17:75360554]
Enhancers that have rs78840473[chr17:75360554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78840473[chr17:75360554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75359026 75363609 ZNF274 GTRD no Bone Marrow (K562) 21790232
chr17 75359026 75363609 ZNF274 GTRD no Bone Marrow (K562) 108298467
chr17 75359026 75363609 ZNF274 GTRD no Bone Marrow (K562) 108298468
chr17 75359244 75367231 AR GTRD no Prostate (PC-3) 21790233
chr17 75359244 75367231 AR GTRD no Prostate (PC-3) 108298469
chr17 75359244 75367231 AR GTRD no Prostate (PC-3) 108298470
chr17 75360296 75363554 ZNF274 GTRD no Blood (GM12878) 21790278
chr17 75360296 75363554 ZNF274 GTRD no Blood (GM12878) 108298530
chr17 75360546 75360556 HINFP JASPAR yes 56073078
chr17 75360548 75360567 PITX2 TRANSFAC yes 56073079
Genes associated with rs78840473[chr17:75360554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More