EnhancerDB
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  3. rs78841251[chr17:70398761]
Enhancers that have rs78841251[chr17:70398761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78841251[chr17:70398761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70398752 70398767 TFAP2A JASPAR yes 55783709
chr17 70398755 70398767 TFAP2A JASPAR yes 55783710
chr17 70398755 70398767 TFAP2B JASPAR yes 55783711
chr17 70398755 70398767 TFAP2C JASPAR yes 55783712
chr17 70398755 70398769 TLX1 JASPAR yes 55783713
Genes associated with rs78841251[chr17:70398761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More