EnhancerDB
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  3. rs78860830[chr16:2175861]
Enhancers that have rs78860830[chr16:2175861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2169469 2181557 enh3844
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs78860830[chr16:2175861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2172975 2176695 ZNF143 GTRD no Epithelial (MCF-7) 108172258
chr16 2173580 2176864 ZNF143 GTRD no Epithelial (MCF-7) 108172259
chr16 2174019 2176216 ZNF143 GTRD no Epithelial (MCF-7) 108172260
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 21684859
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 108172262
chr16 2174953 2176689 ZNF143 GTRD no Epithelial (MCF-7) 108172265
chr16 2175247 2176278 ZNF143 GTRD no Epithelial (MCF-7) 108172270
chr16 2175310 2175886 TCF7L2 GTRD no Colon (HCT116) 21684862
chr16 2175310 2175886 TCF7L2 GTRD no Colon (HCT116) 108172271
chr16 2175842 2175862 TP63 JASPAR yes 9171256
chr16 2175851 2175862 NRF1 JASPAR yes 9171259
chr16 2175853 2175862 SNAI2 JASPAR yes 9171261
chr16 2175853 2175863 ID4 JASPAR yes 9171262
chr16 2175853 2175863 NHLH1 JASPAR yes 9171263
chr16 2175853 2175863 TCF3 JASPAR yes 9171264
chr16 2175853 2175863 TCF4 JASPAR yes 9171265
Genes associated with rs78860830[chr16:2175861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More