EnhancerDB
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  3. rs78871682[chr12:117354432]
Enhancers that have rs78871682[chr12:117354432]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117350745 117365303 enh2616
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78871682[chr12:117354432]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117354422 117354438 ZNF143 JASPAR yes 124032009
chr12 117354423 117354433 SP1 JASPAR yes 124032010
chr12 117354424 117354444 TP63 JASPAR yes 124032012
chr12 117354425 117354443 TP53 JASPAR yes 124032013
chr12 117354425 117354443 TP73 JASPAR yes 124032014
chr12 117354432 117354444 HES5 JASPAR yes 124032015
chr12 117354432 117354444 HES7 JASPAR yes 124032016
chr12 117354432 117354444 PKNOX2 JASPAR yes 124032017
Genes associated with rs78871682[chr12:117354432], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More