EnhancerDB
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  3. rs78881562[chr1:172517459]
Enhancers that have rs78881562[chr1:172517459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172503525 172518495 enh728
Prostate (PC-3) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs78881562[chr1:172517459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172517456 172517474 SRF JASPAR yes 33137202
chr1 172517459 172517469 HOXA13 JASPAR yes 33137203
Genes associated with rs78881562[chr1:172517459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More