EnhancerDB
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  3. rs78884971[chr4:89242219]
Enhancers that have rs78884971[chr4:89242219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89236605 89244975 enh8087
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Lung (A549) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs78884971[chr4:89242219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89242200 89242220 RREB1 JASPAR yes 91165308
chr4 89242202 89242222 RREB1 JASPAR yes 91165309
chr4 89242204 89242224 RREB1 JASPAR yes 91165310
chr4 89242208 89242223 RUNX2 JASPAR yes 91165312
chr4 89242212 89242222 RUNX3 JASPAR yes 91165313
Genes associated with rs78884971[chr4:89242219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More