EnhancerDB
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  3. rs78890520[chr1:22594027]
Enhancers that have rs78890520[chr1:22594027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78890520[chr1:22594027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22594022 22594036 GLIS2 JASPAR yes 27357149
chr1 22594022 22594036 ZIC1 JASPAR yes 27357150
chr1 22594022 22594037 ZIC4 JASPAR yes 27357151
chr1 22594024 22594037 ZBTB18 JASPAR yes 27357152
chr1 22594025 22594037 NHLH1 JASPAR yes 27357153
chr1 22594026 22594036 NHLH1 JASPAR yes 27357154
Genes associated with rs78890520[chr1:22594027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More