EnhancerDB
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  3. rs78909680[chr17:70379518]
Enhancers that have rs78909680[chr17:70379518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78909680[chr17:70379518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70379510 70379524 NR2F1 JASPAR yes 55780943
chr17 70379514 70379524 RORA JASPAR yes 55780944
chr17 70379516 70379524 CREB1 JASPAR yes 55780945
Genes associated with rs78909680[chr17:70379518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More