EnhancerDB
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  3. rs78920910[chr17:70425069]
Enhancers that have rs78920910[chr17:70425069]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78920910[chr17:70425069]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70424742 70425361 ZNF274 GTRD no Blood (GM12878) 21785146
chr17 70424762 70425479 ZNF274 GTRD no Blood (GM12878) 21785147
chr17 70424781 70425520 ZNF274 GTRD no Blood (GM12878) 21785148
chr17 70425059 70425072 POU3F3 JASPAR yes 55787285
chr17 70425060 70425072 POU2F1 JASPAR yes 55787286
chr17 70425061 70425070 POU3F4 JASPAR yes 55787287
chr17 70425061 70425070 POU5F1B JASPAR yes 55787288
chr17 70425061 70425072 NRL JASPAR yes 55787289
Genes associated with rs78920910[chr17:70425069], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More