EnhancerDB
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  3. rs78941048[chr1:154804371]
Enhancers that have rs78941048[chr1:154804371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs78941048[chr1:154804371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154804361 154804371 GSX1 JASPAR yes 32316009
chr1 154804361 154804371 GSX2 JASPAR yes 32316010
chr1 154804361 154804371 HOXA2 JASPAR yes 32316011
chr1 154804361 154804371 HOXB2 JASPAR yes 32316012
chr1 154804361 154804371 HOXB3 JASPAR yes 32316013
chr1 154804361 154804371 LHX2 JASPAR yes 32316014
chr1 154804361 154804371 MEOX1 JASPAR yes 32316015
chr1 154804361 154804371 MEOX2 JASPAR yes 32316016
chr1 154804361 154804371 NOTO JASPAR yes 32316017
chr1 154804362 154804376 POU1F1 JASPAR yes 32316020
Genes associated with rs78941048[chr1:154804371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More