EnhancerDB
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  3. rs78952707[chr16:1349101]
Enhancers that have rs78952707[chr16:1349101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78952707[chr16:1349101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1347697 1349345 ZNF143 GTRD no Epithelial (MCF-7) 21684721
chr16 1348680 1349730 TCF7L2 GTRD no Colon (HCT116) 21684726
chr16 1348680 1349730 TCF7L2 GTRD no Colon (HCT116) 108171413
chr16 1348829 1349332 TCF7L2 GTRD no Colon (HCT116) 21684727
Genes associated with rs78952707[chr16:1349101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More