EnhancerDB
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  3. rs78969059[chr16:2175808]
Enhancers that have rs78969059[chr16:2175808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2169469 2181557 enh3844
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs78969059[chr16:2175808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2172975 2176695 ZNF143 GTRD no Epithelial (MCF-7) 108172258
chr16 2173580 2176864 ZNF143 GTRD no Epithelial (MCF-7) 108172259
chr16 2174019 2176216 ZNF143 GTRD no Epithelial (MCF-7) 108172260
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 21684859
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 108172262
chr16 2174933 2175839 AR GTRD no Prostate (PC-3) 108172264
chr16 2174953 2176689 ZNF143 GTRD no Epithelial (MCF-7) 108172265
chr16 2175247 2176278 ZNF143 GTRD no Epithelial (MCF-7) 108172270
chr16 2175310 2175886 TCF7L2 GTRD no Colon (HCT116) 21684862
chr16 2175310 2175886 TCF7L2 GTRD no Colon (HCT116) 108172271
chr16 2175797 2175812 ESR2 JASPAR yes 9171252
Genes associated with rs78969059[chr16:2175808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 2138711 2185899 - PKD1 ENSG00000008710.13 2185899 0 Esophagus 0.25775 14424