EnhancerDB
  1. Home
  2. SNP
  3. rs78997398[chr19:3346733]
Enhancers that have rs78997398[chr19:3346733]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs78997398[chr19:3346733]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3345983 3347354 TCF7L2 GTRD no Colon (HCT116) 21838793
chr19 3346026 3347358 TCF7L2 GTRD no Colon (HCT116) 21838794
chr19 3346150 3347289 TCF7L2 GTRD no Colon (HCT116) 21838796
chr19 3346718 3346735 RXRA JASPAR yes 112122140
chr19 3346730 3346751 REST JASPAR yes 112122142
chr19 3346731 3346750 REST JASPAR yes 112122143
Genes associated with rs78997398[chr19:3346733], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More