EnhancerDB
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  3. rs79016006[chr17:78800881]
Enhancers that have rs79016006[chr17:78800881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
chr17 78800697 78801105 vista26348
VISTA
Transcript factors that have rs79016006[chr17:78800881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78800116 78801014 TCF7L2 GTRD no Colon (HCT116) 21797361
chr17 78800116 78801014 TCF7L2 GTRD no Colon (HCT116) 108307645
chr17 78800141 78801019 TCF7L2 GTRD no Colon (HCT116) 21797362
chr17 78800141 78801019 TCF7L2 GTRD no Colon (HCT116) 108307646
chr17 78800144 78800953 TCF7L2 GTRD no Colon (HCT116) 21797363
chr17 78800144 78800953 TCF7L2 GTRD no Colon (HCT116) 108307647
chr17 78800155 78800910 ZNF143 GTRD no Epithelial (MCF-7) 21797364
chr17 78800155 78800910 ZNF143 GTRD no Epithelial (MCF-7) 108307648
chr17 78800167 78801047 ZNF143 GTRD no Epithelial (MCF-7) 21797365
chr17 78800167 78801047 ZNF143 GTRD no Epithelial (MCF-7) 108307649
chr17 78800197 78801024 TCF7L2 GTRD no Colon (HCT116) 21797366
chr17 78800197 78801024 TCF7L2 GTRD no Colon (HCT116) 108307650
chr17 78800206 78801023 ZNF143 GTRD no Epithelial (MCF-7) 21797367
chr17 78800206 78801023 ZNF143 GTRD no Epithelial (MCF-7) 108307651
chr17 78800696 78800935 E2F4 UCSC Txn Factor no Conserved 108307652
chr17 78800719 78800955 FOS UCSC Txn Factor no Conserved 108307653
chr17 78800736 78801092 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108307654
chr17 78800737 78800997 STAT3 UCSC Txn Factor no Conserved 108307655
chr17 78800754 78800910 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108307656
chr17 78800782 78801092 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108307657
chr17 78800838 78800987 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108307658
chr17 78800873 78800888 PRDM1 JASPAR yes 21315698
chr17 78800873 78800888 PRDM1 JASPAR yes 56283928
Genes associated with rs79016006[chr17:78800881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More