EnhancerDB
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  3. rs79120306[chr2:216704980]
Enhancers that have rs79120306[chr2:216704980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216688425 216718115 enh6146
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79120306[chr2:216704980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216704965 216704984 CTCF JASPAR yes 80812770
chr2 216704976 216704987 CDX2 JASPAR yes 80812771
chr2 216704977 216704988 HOXA10 JASPAR yes 80812772
chr2 216704978 216704987 CDX1 JASPAR yes 80812773
chr2 216704978 216704988 HOXA13 JASPAR yes 80812774
chr2 216704978 216704988 HOXB13 JASPAR yes 80812775
chr2 216704978 216704988 HOXD13 JASPAR yes 80812776
chr2 216704980 216704995 HNF1A JASPAR yes 80812777
Genes associated with rs79120306[chr2:216704980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More