EnhancerDB
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  3. rs79149007[chr17:76948948]
Enhancers that have rs79149007[chr17:76948948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs79149007[chr17:76948948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76945921 76950302 TCF7L2 GTRD no Colon (HCT116) 21795495
chr17 76946008 76950730 TCF7L2 GTRD no Colon (HCT116) 21795498
chr17 76948354 76949298 TCF7L2 GTRD no Colon (HCT116) 21795508
chr17 76948417 76950750 TCF7L2 GTRD no Colon (HCT116) 21795509
chr17 76948525 76949110 TCF7L2 GTRD no Colon (HCT116) 21795510
chr17 76948619 76949309 TCF7L2 GTRD no Colon (HCT116) 21795511
chr17 76948645 76949234 TCF7L2 GTRD no Colon (HCT116) 21795512
chr17 76948715 76950881 TCF7L2 GTRD no Colon (HCT116) 21795513
chr17 76948943 76948949 SP1 TRANSFAC yes 56192841
chr17 76948943 76948954 E2F1 JASPAR yes 56192842
chr17 76948944 76948949 SP1 TRANSFAC yes 56192843
chr17 76948944 76948955 E2F4 JASPAR yes 56192844
chr17 76948944 76948955 E2F6 JASPAR yes 56192845
chr17 76948945 76948950 SP1 TRANSFAC yes 56192846
Genes associated with rs79149007[chr17:76948948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 76142434 76162258 + C17orf99 ENSG00000187997.7 76142434 786690 Lung 0.296349 16303