EnhancerDB
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  3. rs79209924[chr1:201540393]
Enhancers that have rs79209924[chr1:201540393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
chr1 201540345 201540578 vista4562
VISTA
Transcript factors that have rs79209924[chr1:201540393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201537319 201541087 ZNF143 GTRD no Epithelial (MCF-7) 107856678
chr1 201537506 201540703 ZNF143 GTRD no Epithelial (MCF-7) 107856679
chr1 201537766 201540685 ZNF143 GTRD no Epithelial (MCF-7) 107856680
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 21364780
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 107856681
chr1 201537914 201540604 ZNF143 GTRD no Epithelial (MCF-7) 107856682
chr1 201537930 201540781 ZBTB33 GTRD no Brain (SK-N-SH) 21364782
chr1 201537930 201540781 ZBTB33 GTRD no Brain (SK-N-SH) 107856683
chr1 201537992 201540768 ZBTB33 GTRD no Brain (SK-N-SH) 21364783
chr1 201537992 201540768 ZBTB33 GTRD no Brain (SK-N-SH) 107856684
chr1 201538127 201540586 ZNF143 GTRD no Epithelial (MCF-7) 107856685
chr1 201538188 201540738 ZNF143 GTRD no Epithelial (MCF-7) 107856686
chr1 201538197 201541749 ZNF143 GTRD no Epithelial (MCF-7) 107856687
chr1 201538297 201540648 ZBTB33 GTRD no Brain (SK-N-SH) 21364788
chr1 201538297 201540648 ZBTB33 GTRD no Brain (SK-N-SH) 107856688
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 21364790
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 107856689
chr1 201538504 201540618 ZNF143 GTRD no Epithelial (MCF-7) 107856690
chr1 201539279 201540974 ZNF274 GTRD no Bone Marrow (K562) 21364805
chr1 201539279 201540974 ZNF274 GTRD no Bone Marrow (K562) 107856691
chr1 201539341 201540630 ZBTB33 GTRD no Brain (SK-N-SH) 21364806
chr1 201539341 201540630 ZBTB33 GTRD no Brain (SK-N-SH) 107856692
chr1 201539363 201540561 ZNF274 GTRD no Bone Marrow (K562) 21364807
chr1 201539363 201540561 ZNF274 GTRD no Bone Marrow (K562) 107856693
chr1 201539501 201540863 ZNF274 GTRD no Bone Marrow (K562) 21364813
chr1 201539501 201540863 ZNF274 GTRD no Bone Marrow (K562) 107856694
chr1 201539502 201540897 ZNF274 GTRD no Bone Marrow (K562) 21364814
chr1 201539502 201540897 ZNF274 GTRD no Bone Marrow (K562) 107856695
chr1 201539563 201540651 ZBTB33 GTRD no Brain (SK-N-SH) 21364815
chr1 201539563 201540651 ZBTB33 GTRD no Brain (SK-N-SH) 107856696
chr1 201539668 201540562 ZNF143 GTRD no Epithelial (MCF-7) 107856698
chr1 201539715 201540616 ZBTB33 GTRD no Brain (SK-N-SH) 21364818
chr1 201539715 201540616 ZBTB33 GTRD no Brain (SK-N-SH) 107856699
chr1 201539802 201540558 ZNF274 GTRD no Bone Marrow (K562) 21364819
chr1 201539802 201540558 ZNF274 GTRD no Bone Marrow (K562) 107856700
chr1 201539834 201540450 ZNF274 GTRD no Bone Marrow (K562) 21364820
chr1 201539834 201540450 ZNF274 GTRD no Bone Marrow (K562) 107856701
chr1 201539885 201540679 ZBTB33 GTRD no Brain (SK-N-SH) 21364822
chr1 201539885 201540679 ZBTB33 GTRD no Brain (SK-N-SH) 107856702
chr1 201539939 201540566 ZNF274 GTRD no Bone Marrow (K562) 21364823
chr1 201539939 201540566 ZNF274 GTRD no Bone Marrow (K562) 107856703
chr1 201539942 201540466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364824
chr1 201539942 201540466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856704
chr1 201540004 201540701 ZBTB33 GTRD no Brain (SK-N-SH) 21364826
chr1 201540004 201540701 ZBTB33 GTRD no Brain (SK-N-SH) 107856705
chr1 201540045 201540615 ZNF274 GTRD no Bone Marrow (K562) 21364827
chr1 201540045 201540615 ZNF274 GTRD no Bone Marrow (K562) 107856706
chr1 201540054 201540473 ZNF274 GTRD no Bone Marrow (K562) 21364828
chr1 201540054 201540473 ZNF274 GTRD no Bone Marrow (K562) 107856707
chr1 201540054 201540513 ZNF274 GTRD no Bone Marrow (K562) 21364829
chr1 201540054 201540513 ZNF274 GTRD no Bone Marrow (K562) 107856708
chr1 201540061 201540428 ZNF274 GTRD no Bone Marrow (K562) 21364830
chr1 201540061 201540428 ZNF274 GTRD no Bone Marrow (K562) 107856709
chr1 201540063 201540583 ZNF274 GTRD no Bone Marrow (K562) 21364831
chr1 201540063 201540583 ZNF274 GTRD no Bone Marrow (K562) 107856710
chr1 201540102 201540458 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364832
chr1 201540102 201540458 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856711
chr1 201540148 201540625 MYOD GTRD no Muscle (Myoblast) 21364833
chr1 201540148 201540625 MYOD GTRD no Muscle (Myoblast) 107856712
chr1 201540162 201540435 SOX2 GTRD no Neural Stem Cells (H9) 107856713
chr1 201540211 201540581 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364834
chr1 201540211 201540581 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856714
chr1 201540227 201540587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364835
chr1 201540227 201540587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856715
chr1 201540245 201540701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364836
chr1 201540245 201540701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856716
chr1 201540264 201541320 ZNF274 GTRD no Bone Marrow (K562) 21364837
chr1 201540264 201541320 ZNF274 GTRD no Bone Marrow (K562) 107856717
chr1 201540273 201540583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364838
chr1 201540273 201540583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856718
chr1 201540307 201540587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364839
chr1 201540307 201540587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856719
chr1 201540313 201540577 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364840
chr1 201540313 201540577 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856720
chr1 201540318 201540574 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364841
chr1 201540318 201540574 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856721
chr1 201540389 201540408 RFX2 JASPAR yes 34508369
chr1 201540389 201540408 RFX2 JASPAR yes 118432290
chr1 201540391 201540406 RFX5 JASPAR yes 34508370
chr1 201540391 201540406 RFX5 JASPAR yes 118432291
Genes associated with rs79209924[chr1:201540393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More