EnhancerDB
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  3. rs79215715[chr17:70388556]
Enhancers that have rs79215715[chr17:70388556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79215715[chr17:70388556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70388302 70388587 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784472
chr17 70388436 70388816 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784474
chr17 70388548 70388558 HOXA13 JASPAR yes 55782126
chr17 70388548 70388558 HOXB13 JASPAR yes 55782127
chr17 70388548 70388558 HOXD13 JASPAR yes 55782128
chr17 70388548 70388559 HOXA10 JASPAR yes 55782129
chr17 70388549 70388558 CDX1 JASPAR yes 55782130
Genes associated with rs79215715[chr17:70388556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More