EnhancerDB
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  3. rs79277376[chr17:40516247]
Enhancers that have rs79277376[chr17:40516247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40510425 40522535 enh17159
Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Thyroid Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs79277376[chr17:40516247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40513077 40520281 ZBTB33 GTRD no Lung (A549) 21758607
chr17 40513077 40520281 ZBTB33 GTRD no Lung (A549) 108260425
chr17 40516182 40520263 ZBTB33 GTRD no Lung (A549) 21758608
chr17 40516182 40520263 ZBTB33 GTRD no Lung (A549) 108260426
chr17 40516217 40517698 ZNF274 GTRD no Cervix (HeLa-S3) 21758609
chr17 40516217 40517698 ZNF274 GTRD no Cervix (HeLa-S3) 108260427
chr17 40516222 40517739 ZBTB33 GTRD no Lung (A549) 21758610
chr17 40516222 40517739 ZBTB33 GTRD no Lung (A549) 108260428
chr17 40516225 40517812 ZNF274 GTRD no Bone Marrow (K562) 108260429
chr17 40516241 40516256 MEF2A JASPAR yes 54298490
chr17 40516241 40516257 SRF JASPAR yes 54298491
chr17 40516242 40516257 MEF2A JASPAR yes 54298492
chr17 40516243 40516255 MEF2A JASPAR yes 54298493
chr17 40516243 40516255 MEF2B JASPAR yes 54298494
chr17 40516243 40516255 MEF2D JASPAR yes 54298495
chr17 40516244 40516254 MEF2A JASPAR yes 54298496
chr17 40516245 40516253 FOXL1 JASPAR yes 54298497
Genes associated with rs79277376[chr17:40516247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More