EnhancerDB
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  3. rs79349743[chr1:172888490]
Enhancers that have rs79349743[chr1:172888490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs79349743[chr1:172888490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172888379 172888748 ZNF274 GTRD no Cervix (HeLa-S3) 21350492
chr1 172888379 172888748 ZNF274 GTRD no Cervix (HeLa-S3) 107846310
chr1 172888483 172888494 SPDEF JASPAR yes 33166392
Genes associated with rs79349743[chr1:172888490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More