EnhancerDB
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  3. rs79355555[chr12:53373339]
Enhancers that have rs79355555[chr12:53373339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79355555[chr12:53373339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 21548544
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035373
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035374
chr12 53370149 53373553 ZNF143 GTRD no Epithelial (MCF-7) 21548595
chr12 53370149 53373553 ZNF143 GTRD no Epithelial (MCF-7) 108035433
chr12 53372243 53373351 TCF7L2 GTRD no Colon (HCT116) 21548826
chr12 53372616 53373854 TCF7L2 GTRD no Colon (HCT116) 21548858
chr12 53372663 53373558 TCF7L2 GTRD no Colon (HCT116) 21548860
chr12 53373318 53373339 ZNF263 JASPAR yes 120969621
Genes associated with rs79355555[chr12:53373339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More