EnhancerDB
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  3. rs79399955[chr12:124865875]
Enhancers that have rs79399955[chr12:124865875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124862183 124886902 enh2671
Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs79399955[chr12:124865875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 21580388
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067457
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067458
chr12 124865277 124866436 ZNF143 GTRD no Epithelial (MCF-7) 21580389
chr12 124865277 124866436 ZNF143 GTRD no Epithelial (MCF-7) 108067459
chr12 124865418 124866594 ZNF143 GTRD no Epithelial (MCF-7) 21580390
chr12 124865418 124866594 ZNF143 GTRD no Epithelial (MCF-7) 108067460
chr12 124865499 124866496 ZNF143 GTRD no Epithelial (MCF-7) 21580391
chr12 124865499 124866496 ZNF143 GTRD no Epithelial (MCF-7) 108067461
chr12 124865509 124866400 ZNF143 GTRD no Epithelial (MCF-7) 21580392
chr12 124865509 124866400 ZNF143 GTRD no Epithelial (MCF-7) 108067462
chr12 124865512 124866607 ZNF143 GTRD no Epithelial (MCF-7) 21580393
chr12 124865512 124866607 ZNF143 GTRD no Epithelial (MCF-7) 108067463
chr12 124865554 124866405 ZNF143 GTRD no Epithelial (MCF-7) 21580394
chr12 124865554 124866405 ZNF143 GTRD no Epithelial (MCF-7) 108067464
chr12 124865874 124865889 LEF1 JASPAR yes 124371848
Genes associated with rs79399955[chr12:124865875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More