EnhancerDB
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  3. rs79460244[chr1:40297771]
Enhancers that have rs79460244[chr1:40297771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs79460244[chr1:40297771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40297759 40297772 SMAD2 JASPAR yes 28294867
chr1 40297760 40297773 EOMES JASPAR yes 28294868
chr1 40297762 40297772 TBR1 JASPAR yes 28294869
chr1 40297762 40297773 TBX20 JASPAR yes 28294870
chr1 40297762 40297773 TBX2 JASPAR yes 28294871
chr1 40297763 40297773 TBX21 JASPAR yes 28294872
chr1 40297764 40297772 MGA JASPAR yes 28294873
chr1 40297764 40297772 TBX15 JASPAR yes 28294874
chr1 40297764 40297772 TBX1 JASPAR yes 28294875
chr1 40297764 40297772 TBX4 JASPAR yes 28294876
chr1 40297764 40297772 TBX5 JASPAR yes 28294877
chr1 40297771 40297775 TEAD2 TRANSFAC yes 28294878
Genes associated with rs79460244[chr1:40297771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More