EnhancerDB
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  3. rs79473831[chr6:110857260]
Enhancers that have rs79473831[chr6:110857260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79473831[chr6:110857260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110857257 110857261 LFA1 TRANSFAC yes 104295239
chr6 110857257 110857268 CDX2 JASPAR yes 104295240
chr6 110857258 110857269 HOXA10 JASPAR yes 104295241
chr6 110857259 110857268 CDX1 JASPAR yes 104295242
Genes associated with rs79473831[chr6:110857260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More