EnhancerDB
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  3. rs79482161[chr17:27472574]
Enhancers that have rs79482161[chr17:27472574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79482161[chr17:27472574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27470455 27475576 ZNF274 GTRD no Bone Marrow (K562) 21748788
chr17 27470455 27475576 ZNF274 GTRD no Bone Marrow (K562) 108246465
chr17 27470574 27476033 ZNF274 GTRD no Blood (GM12878) 21748789
chr17 27470574 27476033 ZNF274 GTRD no Blood (GM12878) 108246466
chr17 27470574 27476033 ZNF274 GTRD no Blood (GM12878) 108246467
chr17 27470765 27474916 ZNF274 GTRD no Blood (GM12878) 21748790
chr17 27470765 27474916 ZNF274 GTRD no Blood (GM12878) 108246468
chr17 27470868 27476034 ZNF274 GTRD no Blood (GM12878) 21748791
chr17 27470868 27476034 ZNF274 GTRD no Blood (GM12878) 108246469
chr17 27470868 27476034 ZNF274 GTRD no Blood (GM12878) 108246470
chr17 27470935 27476054 ZNF274 GTRD no Blood (GM12878) 21748792
chr17 27470935 27476054 ZNF274 GTRD no Blood (GM12878) 108246471
chr17 27470935 27476054 ZNF274 GTRD no Blood (GM12878) 108246472
chr17 27471014 27475730 ZNF274 GTRD no Blood (GM12878) 21748793
chr17 27471014 27475730 ZNF274 GTRD no Blood (GM12878) 108246473
chr17 27471022 27474825 ZNF274 GTRD no Blood (GM12878) 21748794
chr17 27471022 27474825 ZNF274 GTRD no Blood (GM12878) 108246474
chr17 27472573 27472594 REST JASPAR yes 53717108
chr17 27472574 27472580 MZF1 JASPAR yes 53717109
Genes associated with rs79482161[chr17:27472574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 26975374 26989207 - SDF2 ENSG00000132581.5 26989207 483367 Esophagus 0.0838422 15580