EnhancerDB
  1. Home
  2. SNP
  3. rs79542228[chr1:22580525]
Enhancers that have rs79542228[chr1:22580525]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs79542228[chr1:22580525]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22580516 22580529 TFAP2A JASPAR yes 27355140
chr1 22580516 22580529 TFAP2B JASPAR yes 27355141
chr1 22580516 22580529 TFAP2C JASPAR yes 27355142
chr1 22580519 22580534 TP53 JASPAR yes 27355143
Genes associated with rs79542228[chr1:22580525], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More