EnhancerDB
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  3. rs79560950[chr2:236410265]
Enhancers that have rs79560950[chr2:236410265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79560950[chr2:236410265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236410258 236410270 IRF1 JASPAR yes 81974811
chr2 236410263 236410267 YY1 TRANSFAC yes 81974812
chr2 236410265 236410271 TCF4 TRANSFAC yes 81974813
Genes associated with rs79560950[chr2:236410265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More