EnhancerDB
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  3. rs7959497[chr12:49592117]
Enhancers that have rs7959497[chr12:49592117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49590445 49597955 enh2325
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
Transcript factors that have rs7959497[chr12:49592117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49592100 49592117 BCL6B JASPAR yes 120763207
chr12 49592108 49592123 HNF1A JASPAR yes 120763208
chr12 49592109 49592122 HNF1B JASPAR yes 120763209
chr12 49592111 49592121 POU6F2 JASPAR yes 120763211
chr12 49592112 49592122 GSX1 JASPAR yes 120763212
chr12 49592112 49592122 GSX2 JASPAR yes 120763213
chr12 49592112 49592122 HOXB3 JASPAR yes 120763214
chr12 49592112 49592122 POU6F1 JASPAR yes 120763215
chr12 49592113 49592121 NKX6-1 JASPAR yes 120763216
chr12 49592113 49592121 NKX6-2 JASPAR yes 120763217
chr12 49592115 49592119 YY1 TRANSFAC yes 120763218
Genes associated with rs7959497[chr12:49592117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More