EnhancerDB
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  3. rs796190839[chr17:70361055]
Enhancers that have rs796190839[chr17:70361055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs796190839[chr17:70361055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70360702 70361397 ZNF143 GTRD no Epithelial (MCF-7) 21784289
chr17 70361037 70361058 IRF1 JASPAR yes 55778107
chr17 70361050 70361065 MEF2C JASPAR yes 55778110
chr17 70361053 70361068 FOXP1 JASPAR yes 55778111
chr17 70361054 70361069 FOXP1 JASPAR yes 55778112
chr17 70361055 70361070 FOXP1 JASPAR yes 55778113
Genes associated with rs796190839[chr17:70361055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More