EnhancerDB
  1. Home
  2. SNP
  3. rs796746399[chr17:53654207]
Enhancers that have rs796746399[chr17:53654207]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
chr17 53654184 53654435 vista25190
VISTA
Transcript factors that have rs796746399[chr17:53654207]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53653819 53654443 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772772
chr17 53653819 53654443 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273086
chr17 53653860 53654380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21772776
chr17 53653860 53654380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273088
chr17 53654159 53654403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772779
chr17 53654159 53654403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273089
chr17 53654186 53654782 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21772780
chr17 53654186 53654782 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273090
chr17 53654200 53654211 FOXC1 JASPAR yes 21257636
chr17 53654200 53654211 FOXC1 JASPAR yes 54861078
chr17 53654203 53654219 SOX8 JASPAR yes 21257637
chr17 53654203 53654219 SOX8 JASPAR yes 54861079
Genes associated with rs796746399[chr17:53654207], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More